STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44596.1long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase); COG1022 Long-chain acyl-CoA synthetases (AMP-forming). (592 aa)    
Predicted Functional Partners:
EDM43597.1
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases.
  
 0.796
EDM44499.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
0.737
EDM45380.1
Polyunsaturated fatty acid synthase PfaA; COG3321 Polyketide synthase modules and related proteins.
    
 0.736
EDM43445.1
Hypothetical protein.
    
  0.724
EDM45221.1
COG0642 Signal transduction histidine kinase.
    
  0.696
EDM44338.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
     
  0.682
EDM45534.1
Hybrid sensory kinase; COG0642 Signal transduction histidine kinase.
     
  0.682
EDM43866.1
Two-component system sensor histidine kinase; COG0642 Signal transduction histidine kinase.
     
  0.682
EDM44453.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
     
 0.677
EDM44650.1
COG1960 Acyl-CoA dehydrogenases.
 
  0.634
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.