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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44612.1Putative transmembrane protein; COG0457 FOG: TPR repeat. (698 aa)    
Predicted Functional Partners:
EDM44613.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.973
EDM43578.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.856
EDM45601.1
Two component transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.834
EDM43748.1
Two component transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.826
EDM45619.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.778
EDM45173.1
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
    
 0.683
EDM44982.1
Transcriptional regulator, sigma-54-related protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
    
 0.674
EDM42879.1
Hypothetical protein.
  
     0.652
EDM44316.1
Two-component response regulator; COG0457 FOG: TPR repeat.
  
  0.617
EDM43012.1
Hypothetical protein; COG4177 ABC-type branched-chain amino acid transport system, permease component.
  
     0.607
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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