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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44623.1Putative 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; COG0693 Putative intracellular protease/amidase. (322 aa)    
Predicted Functional Partners:
EDM44624.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.821
EDM44625.1
Hypothetical protein.
       0.507
EDM45156.1
RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
 
 0.497
EDM44532.1
RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
 
 0.497
EDM43146.1
Peptidase, S24 family, UV repair protein; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases).
   
   0.475
EDM44626.1
Monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
     0.447
EDM45632.1
Hypothetical protein.
   
    0.416
EDM44487.1
Iron-containing alcohol dehydrogenase; COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family.
   
    0.416
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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