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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44638.1Hypothetical protein; COG1396 Predicted transcriptional regulators. (104 aa)    
Predicted Functional Partners:
EDM44637.1
COG3550 Uncharacterized protein related to capsule biosynthesis enzymes.
  
 
 0.926
EDM43949.1
Competence-damage inducible protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
    
 0.705
EDM43338.1
Hypothetical protein; COG0457 FOG: TPR repeat.
    
 0.622
EDM44636.1
Monooxygenase family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
       0.620
EDM42919.1
Hypothetical protein; COG0457 FOG: TPR repeat.
     
 0.526
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
  0.510
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.510
EDM44639.1
COG3503 Predicted membrane protein.
       0.470
EDM44640.1
Hypothetical protein.
       0.470
EDM44635.1
Hypothetical protein.
       0.413
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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