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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44646.1Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators. (135 aa)    
Predicted Functional Partners:
EDM43443.1
Hypothetical protein; COG1983 Putative stress-responsive transcriptional regulator.
 
   
 0.610
EDM44647.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
     
 0.605
EDM43069.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.595
EDM45556.1
Gamma-glutamyl carboxylase-like protein.
  
  
 0.594
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
  
 0.592
EDM44650.1
COG1960 Acyl-CoA dehydrogenases.
 
 
  0.555
EDM43642.1
COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
  
 0.550
EDM44645.1
Hypothetical protein.
       0.517
EDM43909.1
COG3958 Transketolase, C-terminal subunit.
  
  
  0.515
EDM44448.1
Hypothetical protein; COG0210 Superfamily I DNA and RNA helicases.
  
     0.504
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.