STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44652.1Probable extracellular nuclease; COG3210 Large exoproteins involved in heme utilization or adhesion. (1289 aa)    
Predicted Functional Partners:
EDM44948.1
Lipase/acylhydrolase family protein; COG2755 Lysophospholipase L1 and related esterases.
   
 0.797
EDM44214.1
COG5651 PPE-repeat proteins.
  
 
  0.758
EDM44819.1
Hypothetical protein; COG3291 FOG: PKD repeat.
  
 
  0.755
EDM44725.1
Hypothetical protein.
  
 
  0.721
EDM45659.1
Hypothetical protein.
  
 
  0.713
EDM45506.1
CHU large protein; uncharacterized.
  
 
  0.707
EDM45313.1
Hypothetical protein.
  
 
  0.682
EDM45509.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
 
 
  0.678
EDM43177.1
Hypothetical protein.
  
 
  0.661
EDM45507.1
CHU large protein; mannosidase-related protein.
  
 
  0.652
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.