STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44654.1Hypothetical protein; COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N). (297 aa)    
Predicted Functional Partners:
EDM44655.1
Peptidase M28; COG2234 Predicted aminopeptidases.
 
     0.764
EDM44652.1
Probable extracellular nuclease; COG3210 Large exoproteins involved in heme utilization or adhesion.
 
  
  0.596
EDM44653.1
Hypothetical protein.
       0.541
EDM44228.1
Hypothetical protein.
  
     0.529
EDM44214.1
COG5651 PPE-repeat proteins.
  
    0.518
EDM44155.1
Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin; COG1876 D-alanyl-D-alanine carboxypeptidase.
  
     0.516
EDM43558.1
TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
   0.509
EDM44657.1
COG4430 Uncharacterized protein conserved in bacteria.
 
     0.509
EDM45435.1
Hypothetical protein.
  
     0.499
EDM43745.1
Hypothetical protein.
  
     0.443
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.