Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM44655.1Peptidase M28; COG2234 Predicted aminopeptidases. (443 aa)    
Predicted Functional Partners:
EDM44654.1
Hypothetical protein; COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N).
 
     0.764
EDM44656.1
COG0308 Aminopeptidase N.
   
  0.572
EDM43246.1
Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase.
  
    0.553
EDM44653.1
Hypothetical protein.
       0.488
EDM43137.1
Mn2+/Fe2+ transporter, NRAMP family protein; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.
  
     0.460
rnr
Exoribonuclease II; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
   
  0.457
EDM44657.1
COG4430 Uncharacterized protein conserved in bacteria.
       0.454
EDM43959.1
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative; COG2866 Predicted carboxypeptidase.
  
     0.439
EDM43136.1
Hypothetical protein.
  
     0.429
EDM45721.1
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
  
     0.426
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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