Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44664.1COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain. (388 aa)    
Predicted Functional Partners:
EDM44663.1
COG1239 Mg-chelatase subunit ChlI.
    0.929
EDM44665.1
Hypothetical protein; COG4409 Neuraminidase (sialidase).
       0.468
bshC
COG4365 Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
  
     0.454
EDM44666.1
COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
       0.446
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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