STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44681.1Hypothetical protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (444 aa)    
Predicted Functional Partners:
EDM44677.1
COG3279 Response regulator of the LytR/AlgR family.
 
  0.922
EDM43205.1
Two-component system response regulator protein; COG3279 Response regulator of the LytR/AlgR family.
  
  0.835
EDM44134.1
Putative two-component system response regulator; COG3279 Response regulator of the LytR/AlgR family.
  
  0.834
EDM45686.1
COG3279 Response regulator of the LytR/AlgR family.
  
  0.831
EDM44398.1
COG3279 Response regulator of the LytR/AlgR family.
  
  0.827
EDM42858.1
COG3279 Response regulator of the LytR/AlgR family.
  
  0.827
EDM44458.1
COG3279 Response regulator of the LytR/AlgR family.
  
  0.823
EDM44682.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.778
EDM44292.1
Transcriptional regulator; COG0784 FOG: CheY-like receiver.
  
  0.698
EDM44679.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.666
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.