STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44690.1COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1. (181 aa)    
Predicted Functional Partners:
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
 
  0.883
EDM44691.1
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
 
 
  0.881
EDM44310.1
Hypothetical protein.
  
 
   0.845
EDM43992.1
Tetratricopeptide repeat family protein; COG0457 FOG: TPR repeat.
   
 0.829
EDM44689.1
Hypothetical protein; COG0618 Exopolyphosphatase-related proteins.
       0.808
EDM43780.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
 
   0.792
EDM44781.1
COG0457 FOG: TPR repeat.
  
 
  0.792
EDM42828.1
Putative hemin receptor.
  
 
   0.743
EDM45247.1
Hypothetical protein.
  
     0.726
ppnK
Inorganic polyphosphate/ATP-NAD kinase.
  
     0.722
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.