STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44691.1COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family. (367 aa)    
Predicted Functional Partners:
EDM45739.1
COG2021 Homoserine acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
  
  0.986
EDM45740.1
Bifunctional protein: aspartokinase I; COG0460 Homoserine dehydrogenase.
  
  0.986
EDM43992.1
Tetratricopeptide repeat family protein; COG0457 FOG: TPR repeat.
  
 0.977
EDM43937.1
Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family.
   
 0.975
EDM45075.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
    
 0.956
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.955
EDM44004.1
Heat shock protein Hsp70; COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
 
 0.954
EDM44414.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
    
 0.943
EDM44932.1
Heat shock protein Hsp70; COG0443 Molecular chaperone.
  
 0.942
EDM44934.1
COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
  
 0.942
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.