STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44696.1Putative transmembrane protein; COG1714 Predicted membrane protein/domain. (240 aa)    
Predicted Functional Partners:
EDM44697.1
COG1300 Uncharacterized membrane protein.
 
    0.927
EDM44702.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
    0.916
EDM44699.1
Hypothetical protein.
 
     0.914
EDM44700.1
Hypothetical protein.
 
     0.914
EDM44698.1
Hypothetical protein.
 
     0.910
EDM44701.1
MoxR-like ATPase, possible regulator; COG0714 MoxR-like ATPases.
 
     0.699
EDM44695.1
yadS protein; COG2860 Predicted membrane protein.
       0.521
EDM43907.1
COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).
   
    0.502
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.