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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44703.1COG4704 Uncharacterized protein conserved in bacteria. (144 aa)    
Predicted Functional Partners:
EDM44704.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.504
EDM44697.1
COG1300 Uncharacterized membrane protein.
       0.447
EDM44698.1
Hypothetical protein.
       0.447
EDM44699.1
Hypothetical protein.
       0.447
EDM44700.1
Hypothetical protein.
       0.447
EDM44701.1
MoxR-like ATPase, possible regulator; COG0714 MoxR-like ATPases.
       0.447
EDM44702.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
       0.447
EDM42830.1
Transcriptional regulator, putative; COG1396 Predicted transcriptional regulators.
  
     0.446
EDM43521.1
beta-Ig-H3/fasciclin; COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.430
EDM44965.1
Integrase/recombinase; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.408
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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