Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM44720.1Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly. (337 aa)    
Predicted Functional Partners:
ctaB
Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.975
EDM44273.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.852
EDM44274.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.832
EDM43712.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
  0.804
EDM45654.1
Peptidase M16-like protein; COG0612 Predicted Zn-dependent peptidases.
    
  0.776
EDM45655.1
Probable peptidase; COG0612 Predicted Zn-dependent peptidases.
    
  0.776
EDM44539.1
Peptidase, M16 family protein; COG0612 Predicted Zn-dependent peptidases.
    
  0.776
EDM45660.1
COG0694 Thioredoxin-like proteins and domains.
  
 
  0.758
EDM45679.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 
 0.741
EDM45680.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 
 0.741
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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