STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44722.1Hypothetical protein; COG0497 ATPase involved in DNA repair. (352 aa)    
Predicted Functional Partners:
EDM45330.1
Hypothetical protein; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1.
  
     0.672
EDM43541.1
COG1396 Predicted transcriptional regulators.
  
     0.666
EDM44721.1
Hypothetical protein.
 
     0.642
EDM45603.1
Hypothetical protein; COG3577 Predicted aspartyl protease.
  
     0.641
EDM44724.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.596
EDM45207.1
Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.587
EDM43908.1
Hypothetical protein; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
  
     0.567
EDM45673.1
Hypothetical protein.
  
     0.565
EDM44310.1
Hypothetical protein.
  
     0.517
EDM43780.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.509
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.