STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44724.1Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component. (251 aa)    
Predicted Functional Partners:
EDM44723.1
Probable ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.967
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
    
  0.761
EDM44053.1
Hypothetical protein.
  
     0.756
EDM43979.1
COG1131 ABC-type multidrug transport system, ATPase component.
  
 0.732
EDM44051.1
Hypothetical protein; COG0725 ABC-type molybdate transport system, periplasmic component.
  
     0.706
EDM44052.1
Hypothetical protein.
  
     0.675
EDM44209.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.630
EDM44304.1
COG2819 Predicted hydrolase of the alpha/beta superfamily.
  
     0.610
EDM44081.1
Ribonuclease Z.
  
     0.610
EDM44722.1
Hypothetical protein; COG0497 ATPase involved in DNA repair.
 
     0.596
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.