Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44750.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
EDM44749.1
Chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
       0.809
EDM44751.1
COG0289 Dihydrodipicolinate reductase; Belongs to the DapB family.
       0.809
EDM44761.1
Hypothetical protein; COG0296 1,4-alpha-glucan branching enzyme.
  
     0.731
EDM44752.1
COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
 
     0.720
EDM45298.1
Hypothetical protein.
  
     0.672
EDM44983.1
Hypothetical protein.
  
    0.661
EDM45688.1
COG2825 Outer membrane protein.
  
     0.657
EDM44753.1
Hypothetical protein.
 
     0.618
EDM42828.1
Putative hemin receptor.
  
     0.593
EDM43780.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.593
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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