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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44779.1Hypothetical protein. (574 aa)    
Predicted Functional Partners:
EDM44752.1
COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
 
   
 0.741
EDM44780.1
COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.665
EDM43780.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
  
 0.660
EDM44781.1
COG0457 FOG: TPR repeat.
 
    0.643
EDM43076.1
Hypothetical protein.
  
   
 0.614
EDM44867.1
Hypothetical protein; COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
  
     0.598
EDM42934.1
Hypothetical protein; COG0795 Predicted permeases.
 
  
 0.594
EDM43338.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
  
 0.591
EDM45298.1
Hypothetical protein.
  
    0.576
EDM43952.1
Hypothetical protein.
  
     0.574
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.