STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44794.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
EDM43659.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.666
EDM44706.1
Hypothetical protein.
  
     0.664
EDM45575.1
Hypothetical protein.
  
     0.573
EDM42918.1
CHU large protein; uncharacterized.
  
     0.484
EDM42876.1
Putative orphan protein.
  
     0.478
EDM45298.1
Hypothetical protein.
  
     0.463
EDM43558.1
TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
     0.448
EDM43316.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.416
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.