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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42832.1COG0732 Restriction endonuclease S subunits. (438 aa)    
Predicted Functional Partners:
EDM42831.1
COG0286 Type I restriction-modification system methyltransferase subunit.
 
 0.998
EDM42834.1
DEAD/DEAH box helicase; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
 
  
 0.981
EDM44952.1
Hypothetical protein; COG0286 Type I restriction-modification system methyltransferase subunit.
 
 
 0.934
EDM44694.1
COG1002 Type II restriction enzyme, methylase subunits.
  
 
 0.904
EDM42830.1
Transcriptional regulator, putative; COG1396 Predicted transcriptional regulators.
  
    0.784
EDM42833.1
Hypothetical protein.
       0.780
EDM43960.1
Hypothetical protein.
  
 
 0.734
EDM44951.1
COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
  
 0.683
EDM44953.1
Type I restriction-modification system specificity determinant protein; COG0732 Restriction endonuclease S subunits.
 
     0.573
atpF
ATP synthase, subunit B (H(+)-transporting two-sector ATPase); Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.506
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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