close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42854.1Hypothetical protein; COG2951 Membrane-bound lytic murein transglycosylase B. (500 aa)    
Predicted Functional Partners:
EDM43177.1
Hypothetical protein.
 
     0.588
EDM45313.1
Hypothetical protein.
 
     0.571
EDM45337.1
Hypothetical protein.
 
     0.538
EDM43941.1
Glycosyl hydrolase; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.
  
  
  0.519
EDM45111.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
   0.517
EDM44662.1
COG1652 Uncharacterized protein containing LysM domain.
  
 
   0.491
EDM45110.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
   0.490
EDM43113.1
COG0236 Acyl carrier protein.
  
   0.469
EDM44344.1
Hypothetical protein.
  
 
   0.451
EDM43347.1
Peptidase S41; COG0793 Periplasmic protease.
   
  0.443
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.