STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMC99527.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
AMC99529.1
Hypothetical protein.
       0.752
cysJ
Sulfite reductase [NADPH] flavoprotein alpha-component.
       0.748
AMC99759.1
FixH.
  
     0.697
ccoP2_1
Cbb3-type cytochrome c oxidase subunit CcoP2; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
     0.552
AMD01107.1
Hypothetical protein.
  
     0.482
dctB_2
C4-dicarboxylate transport sensor protein DctB.
  
     0.477
fadM
Long-chain acyl-CoA thioesterase FadM.
  
     0.458
AMD02448.1
Hypothetical protein.
  
     0.457
AMD00440.1
Murein transglycosylase C.
  
     0.438
AMD01263.1
Thioesterase superfamily protein.
  
     0.431
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.