Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMC99121.1 | alsT | LOKO_00017 | LOKO_00439 | Sodium:neurotransmitter symporter family protein; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Amino-acid carrier protein AlsT. | 0.496 |
AMC99162.1 | alsT | LOKO_00058 | LOKO_00439 | Sodium:neurotransmitter symporter family protein; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | Amino-acid carrier protein AlsT. | 0.501 |
AMD01355.1 | alsT | LOKO_02295 | LOKO_00439 | Sodium:neurotransmitter symporter family protein. | Amino-acid carrier protein AlsT. | 0.501 |
alsT | AMC99121.1 | LOKO_00439 | LOKO_00017 | Amino-acid carrier protein AlsT. | Sodium:neurotransmitter symporter family protein; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.496 |
alsT | AMC99162.1 | LOKO_00439 | LOKO_00058 | Amino-acid carrier protein AlsT. | Sodium:neurotransmitter symporter family protein; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.501 |
alsT | AMD01355.1 | LOKO_00439 | LOKO_02295 | Amino-acid carrier protein AlsT. | Sodium:neurotransmitter symporter family protein. | 0.501 |
alsT | clcA | LOKO_00439 | LOKO_01099 | Amino-acid carrier protein AlsT. | H(+)/Cl(-) exchange transporter ClcA. | 0.559 |
alsT | gcvT_1 | LOKO_00439 | LOKO_00440 | Amino-acid carrier protein AlsT. | Aminomethyltransferase. | 0.607 |
alsT | putP | LOKO_00439 | LOKO_03128 | Amino-acid carrier protein AlsT. | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.688 |
clcA | alsT | LOKO_01099 | LOKO_00439 | H(+)/Cl(-) exchange transporter ClcA. | Amino-acid carrier protein AlsT. | 0.559 |
gcvT_1 | alsT | LOKO_00440 | LOKO_00439 | Aminomethyltransferase. | Amino-acid carrier protein AlsT. | 0.607 |
putP | alsT | LOKO_03128 | LOKO_00439 | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Amino-acid carrier protein AlsT. | 0.688 |