STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMC99575.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
AMC99574.1
Hypothetical protein.
       0.729
grxA
Glutaredoxin-1.
 
     0.638
ghrA
Glyoxylate/hydroxypyruvate reductase A.
       0.621
AMD01077.1
Hypothetical protein.
  
     0.500
AMC99542.1
Hypothetical protein.
  
     0.493
AMC99576.1
Putative ABC transporter-binding protein precursor.
       0.489
sugA
Trehalose transport system permease protein SugA.
       0.462
zapB
Cell division protein ZapB.
  
     0.460
pncB2
Nicotinate phosphoribosyltransferase pncB2; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
       0.450
sugB
Trehalose transport system permease protein SugB.
       0.450
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.