STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoB_1Phosphate regulon transcriptional regulatory protein PhoB. (358 aa)    
Predicted Functional Partners:
barA_2
Signal transduction histidine-protein kinase BarA.
 
 
 0.956
senX3
Signal-transduction histidine kinase senX3.
 
 
 0.951
barA_3
Signal transduction histidine-protein kinase BarA.
 
 0.950
arcB
Aerobic respiration control sensor protein ArcB.
 
 0.927
yycG
Sensor histidine kinase YycG.
 
 0.816
phoR_3
Phosphate regulon sensor protein PhoR.
 
 
 0.807
rstB_1
Sensor protein RstB.
  
 
 
 0.790
tcrA
Transcriptional regulatory protein TcrA.
  
 
 0.777
alaS_1
Alanine--tRNA ligase.
       0.773
zraS_1
Sensor protein ZraS.
 
 
 
 0.767
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.