STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crpcAMP receptor protein. (255 aa)    
Predicted Functional Partners:
ccmH_2
Cytochrome c-type biogenesis protein CcmH precursor.
       0.720
dsbE_1
Thiol:disulfide interchange protein DsbE.
     
 0.683
ccmF_1
Cytochrome c-type biogenesis protein CcmF.
       0.682
ccmH_1
Cytochrome c-type biogenesis protein CcmH precursor; Possible subunit of a heme lyase.
       0.682
nirS_1
Nitrite reductase precursor.
 
   
 0.549
norB
Nitric oxide reductase subunit B.
 
  
 0.516
anr_1
Transcriptional activator protein Anr.
  
     0.505
cyaA
Adenylate cyclase 1.
  
 0.491
anr_2
Transcriptional activator protein Anr.
  
     0.478
barA_2
Signal transduction histidine-protein kinase BarA.
   
 
 0.465
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.