STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMD00775.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
AMD00776.1
Hypothetical protein.
  
 0.996
AMD00774.1
Hypothetical protein.
    
0.990
nirS_3
Nitrite reductase precursor.
 
  
 0.977
albA
Antilisterial bacteriocin subtilosin biosynthesis protein AlbA.
 
  
 0.976
ccoP2_2
Cbb3-type cytochrome c oxidase subunit CcoP2.
 
    0.949
nirS_2
Nitrite reductase precursor.
 
  
 0.946
AMD00777.1
Hypothetical protein.
 
   
0.933
nirS_1
Nitrite reductase precursor.
 
  
 0.815
cysG_1
Siroheme synthase; Belongs to the precorrin methyltransferase family.
 
  
 0.809
norB
Nitric oxide reductase subunit B.
 
  
 0.590
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.