STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acdA_4Acyl-CoA dehydrogenase. (377 aa)    
Predicted Functional Partners:
fadB_3
Putative enoyl-CoA hydratase.
 
 0.992
acrC_2
Acryloyl-CoA reductase (NADH).
     0.973
fadB_4
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.786
mmgC_2
Acyl-CoA dehydrogenase.
  
     0.753
etfA_4
Electron transfer flavoprotein subunit alpha.
 
 0.731
etfA_1
Electron transfer flavoprotein subunit alpha.
 
 
 0.702
fadB_1
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.682
siaT_14
Sialic acid TRAP transporter permease protein SiaT.
       0.665
etfB
Electron transfer flavoprotein subunit beta.
 
 
 0.653
AMD01202.1
NMT1/THI5 like protein.
 
     0.618
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.