STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMD01364.1Putative inner membrane protein. (341 aa)    
Predicted Functional Partners:
AMD01365.1
Sulfur oxidation protein SoxY.
 
     0.932
fccB
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor.
 
     0.891
fccA
Cytochrome subunit of sulfide dehydrogenase.
 
     0.823
AMD01644.1
Ferredoxin.
 
   
 0.530
psrA
Polysulfide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.494
tusA_2
Sulfurtransferase TusA.
 
  
 0.486
AMD01647.1
Polysulfide reductase, NrfD.
  
     0.448
AMD02746.1
4-oxalocrotonate tautomerase.
  
     0.440
AMC99885.1
Carboxysome Shell Carbonic Anhydrase.
  
     0.420
tusA_1
Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family.
  
  
 0.412
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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