STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagCN-acetylglucosamine repressor. (384 aa)    
Predicted Functional Partners:
rbsB
D-ribose-binding periplasmic protein precursor.
 
  
 0.681
rbsC
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.631
mglA
Galactose/methyl galactoside import ATP-binding protein MglA.
 
   
 0.566
pldh-t
Pyridoxal 4-dehydrogenase.
 
  
 0.565
iolE
Inosose dehydratase.
 
   
 0.541
yvaA
Putative oxidoreductase YvaA.
 
   
 0.510
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.504
malL
Oligo-1,6-glucosidase.
 
   
 0.464
galM
Aldose 1-epimerase.
     
 0.457
AMD01405.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
  
  
 0.452
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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