Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMD00019.1 | AMD01597.1 | LOKO_00942 | LOKO_02537 | Hypothetical protein. | Hypothetical protein. | 0.413 |
AMD00792.1 | AMD01597.1 | LOKO_01724 | LOKO_02537 | Hypothetical protein. | Hypothetical protein. | 0.745 |
AMD01530.1 | AMD01597.1 | LOKO_02470 | LOKO_02537 | Hypothetical protein. | Hypothetical protein. | 0.519 |
AMD01595.1 | AMD01596.1 | LOKO_02535 | LOKO_02536 | Hypothetical protein. | Virulence protein. | 0.573 |
AMD01595.1 | AMD01597.1 | LOKO_02535 | LOKO_02537 | Hypothetical protein. | Hypothetical protein. | 0.690 |
AMD01595.1 | htrB_2 | LOKO_02535 | LOKO_02538 | Hypothetical protein. | Lipid A biosynthesis lauroyl acyltransferase. | 0.481 |
AMD01595.1 | ycaD | LOKO_02535 | LOKO_02534 | Hypothetical protein. | Putative MFS-type transporter YcaD. | 0.701 |
AMD01596.1 | AMD01595.1 | LOKO_02536 | LOKO_02535 | Virulence protein. | Hypothetical protein. | 0.573 |
AMD01596.1 | AMD01597.1 | LOKO_02536 | LOKO_02537 | Virulence protein. | Hypothetical protein. | 0.756 |
AMD01596.1 | htrB_2 | LOKO_02536 | LOKO_02538 | Virulence protein. | Lipid A biosynthesis lauroyl acyltransferase. | 0.739 |
AMD01596.1 | ycaD | LOKO_02536 | LOKO_02534 | Virulence protein. | Putative MFS-type transporter YcaD. | 0.628 |
AMD01597.1 | AMD00019.1 | LOKO_02537 | LOKO_00942 | Hypothetical protein. | Hypothetical protein. | 0.413 |
AMD01597.1 | AMD00792.1 | LOKO_02537 | LOKO_01724 | Hypothetical protein. | Hypothetical protein. | 0.745 |
AMD01597.1 | AMD01530.1 | LOKO_02537 | LOKO_02470 | Hypothetical protein. | Hypothetical protein. | 0.519 |
AMD01597.1 | AMD01595.1 | LOKO_02537 | LOKO_02535 | Hypothetical protein. | Hypothetical protein. | 0.690 |
AMD01597.1 | AMD01596.1 | LOKO_02537 | LOKO_02536 | Hypothetical protein. | Virulence protein. | 0.756 |
AMD01597.1 | htrB_2 | LOKO_02537 | LOKO_02538 | Hypothetical protein. | Lipid A biosynthesis lauroyl acyltransferase. | 0.870 |
AMD01597.1 | ycaD | LOKO_02537 | LOKO_02534 | Hypothetical protein. | Putative MFS-type transporter YcaD. | 0.434 |
htrB_2 | AMD01595.1 | LOKO_02538 | LOKO_02535 | Lipid A biosynthesis lauroyl acyltransferase. | Hypothetical protein. | 0.481 |
htrB_2 | AMD01596.1 | LOKO_02538 | LOKO_02536 | Lipid A biosynthesis lauroyl acyltransferase. | Virulence protein. | 0.739 |
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