STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltR_2HTH-type transcriptional regulator GltR; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
cmpR_1
HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family.
  
     0.705
gcvA_2
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.705
cysL_4
HTH-type transcriptional regulator CysL; Belongs to the LysR transcriptional regulatory family.
  
     0.697
AMD02120.1
Hypothetical protein.
 
    0.664
cmpR_5
HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family.
  
     0.654
cysL_2
HTH-type transcriptional regulator CysL; Belongs to the LysR transcriptional regulatory family.
  
     0.621
pdhB
Pyruvate dehydrogenase E1 component subunit beta.
 
   
 0.618
dmlR_1
HTH-type transcriptional regulator DmlR; Belongs to the LysR transcriptional regulatory family.
  
     0.618
allS_2
HTH-type transcriptional activator AllS; Belongs to the LysR transcriptional regulatory family.
  
     0.613
gltC
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
  
     0.588
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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