STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMD02240.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
AMD02239.1
Hypothetical protein.
       0.828
AMD01087.1
Hypothetical protein.
  
     0.596
rhtB_4
Homoserine/homoserine lactone efflux protein.
       0.482
AMC99870.1
Phosphate-starvation-inducible E.
  
     0.476
AMD02169.1
Hypothetical protein.
  
     0.463
AMD02442.1
Hypothetical protein.
  
     0.457
dadA_2
D-amino acid dehydrogenase small subunit.
       0.453
hcpA
Major exported protein.
  
     0.449
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.