STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdM_2Type I restriction enzyme EcoKI M protein. (659 aa)    
Predicted Functional Partners:
AMD02499.1
EcoKI restriction-modification system protein HsdS.
 
 0.999
hsdR_2
Type I restriction enzyme EcoR124II R protein.
 
 
 0.991
hsdS
Type-1 restriction enzyme EcoKI specificity protein.
 
 
 0.980
AMD02500.1
Hypothetical protein.
 
     0.905
AMD02501.1
Hypothetical protein.
       0.725
AMD00036.1
Hypothetical protein.
  
  
 0.620
AMD02497.1
Hypothetical protein.
       0.543
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.