STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntB_3Manganese transport system membrane protein MntB. (296 aa)    
Predicted Functional Partners:
fhuC_2
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
 
 0.992
AMD02676.1
Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.
  
 0.984
mntB_2
Manganese transport system membrane protein MntB.
 
  
 
0.950
AMC99981.1
Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.
  
 0.942
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC.
 
 
 0.942
mntB_1
Manganese transport system membrane protein MntB.
  
  
 
0.484
zur
Zinc uptake regulation protein; Belongs to the Fur family.
 
  
 0.456
lptB_4
Lipopolysaccharide export system ATP-binding protein LptB.
     
 0.405
lptG
Lipopolysaccharide export system permease protein LptG.
     
 0.400
Your Current Organism:
Halomonas chromatireducens
NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c
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