Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
barA_1 | barA_2 | LOKO_00694 | LOKO_02075 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.776 |
barA_1 | barA_3 | LOKO_00694 | LOKO_02159 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.967 |
barA_1 | phoR_3 | LOKO_00694 | LOKO_03721 | Signal transduction histidine-protein kinase BarA. | Phosphate regulon sensor protein PhoR. | 0.811 |
barA_1 | tcrA | LOKO_00694 | LOKO_03720 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein TcrA. | 0.790 |
barA_2 | barA_1 | LOKO_02075 | LOKO_00694 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.776 |
barA_2 | barA_3 | LOKO_02075 | LOKO_02159 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.998 |
barA_2 | kdpE | LOKO_02075 | LOKO_02519 | Signal transduction histidine-protein kinase BarA. | KDP operon transcriptional regulatory protein KdpE. | 0.934 |
barA_2 | ompR | LOKO_02075 | LOKO_02714 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein OmpR. | 0.937 |
barA_2 | phoB_2 | LOKO_02075 | LOKO_03099 | Signal transduction histidine-protein kinase BarA. | Phosphate regulon transcriptional regulatory protein PhoB. | 0.935 |
barA_2 | phoP_1 | LOKO_02075 | LOKO_01338 | Signal transduction histidine-protein kinase BarA. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.933 |
barA_2 | phoP_2 | LOKO_02075 | LOKO_03352 | Signal transduction histidine-protein kinase BarA. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.934 |
barA_2 | phoR_3 | LOKO_02075 | LOKO_03721 | Signal transduction histidine-protein kinase BarA. | Phosphate regulon sensor protein PhoR. | 0.964 |
barA_2 | rstA | LOKO_02075 | LOKO_03342 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein RstA. | 0.969 |
barA_2 | tcrA | LOKO_02075 | LOKO_03720 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein TcrA. | 0.975 |
barA_3 | barA_1 | LOKO_02159 | LOKO_00694 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.967 |
barA_3 | barA_2 | LOKO_02159 | LOKO_02075 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.998 |
barA_3 | kdpE | LOKO_02159 | LOKO_02519 | Signal transduction histidine-protein kinase BarA. | KDP operon transcriptional regulatory protein KdpE. | 0.956 |
barA_3 | ompR | LOKO_02159 | LOKO_02714 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein OmpR. | 0.960 |
barA_3 | phoB_2 | LOKO_02159 | LOKO_03099 | Signal transduction histidine-protein kinase BarA. | Phosphate regulon transcriptional regulatory protein PhoB. | 0.959 |
barA_3 | phoP_1 | LOKO_02159 | LOKO_01338 | Signal transduction histidine-protein kinase BarA. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.979 |
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