STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGRI_045750Uncharacterized protein. (1256 aa)    
Predicted Functional Partners:
PGRI_030030
Nucleoporin.
    
 0.858
PGRI_009590
Nucleoporin interacting component Nup93/Nic96.
    
 
 0.807
PGRI_087070
Uncharacterized protein.
   
 
 0.774
PGRI_088200
Nucleoporin protein Ndc1-Nup.
    
 0.764
PGRI_022120
Inner nuclear membrane protein MAN1.
   
 
 0.745
PGRI_078580
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.740
PGRI_049310
Aldolase-type TIM barrel.
  
 0.715
PGRI_089670
Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase.
   
 0.708
PGRI_010690
Dehydrogenase, multihelical.
   
 0.705
PGRI_010700
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
 0.705
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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