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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGRI_047000Splicing factor PWI. (443 aa)    
Predicted Functional Partners:
PGRI_081800
Regulator of nonsense-mediated decay, UPF3.
    
 0.991
PGRI_068500
mRNA splicing factor, Cwf21.
   
 0.978
PGRI_071870
Splicing factor PWI.
   
 0.969
PGRI_040450
WD_REPEATS_REGION domain-containing protein.
    
 0.959
PGRI_062320
Up-frameshift suppressor 2.
    
 
 0.959
PGRI_074810
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.957
PGRI_076560
MIF4-like, type 1/2/3.
    
 0.955
PGRI_019740
WW/Rsp5/WWP.
   
 0.924
PGRI_007090
Uncharacterized protein.
    
 0.920
PGRI_022680
Splicing factor 3B subunit 1.
   
 
 0.918
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.