STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGRI_050150Uncharacterized protein. (834 aa)    
Predicted Functional Partners:
PGRI_014420
Uncharacterized protein.
    
  0.477
PGRI_086970
SKP1 component, dimerization; Belongs to the SKP1 family.
    
  0.477
PGRI_052610
Ubiquitin supergroup.
    
  0.475
PGRI_005690
Tetratricopeptide-like helical.
    
  0.469
PGRI_013800
MHYT domain-containing protein.
    
  0.466
PGRI_052690
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.459
PGRI_068730
Centromere protein Cenp-I.
    
  0.459
PGRI_019140
PAPA-1-like conserved region.
    
  0.455
PGRI_064980
Chromo domain/shadow.
    
  0.455
PGRI_087960
Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.452
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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