STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGRI_024500Taurine catabolism dioxygenase TauD/TfdA. (378 aa)    
Predicted Functional Partners:
PGRI_049300
WD_REPEATS_REGION domain-containing protein.
   
  0.598
PGRI_075620
Armadillo-like helical.
    
 0.585
PGRI_044030
Pectin lyase fold/virulence factor.
    
 0.579
PGRI_002810
Pectin lyase fold/virulence factor.
    
 0.579
PGRI_051250
Glycoside hydrolase, superfamily.
    
 0.571
PGRI_037910
Glycoside hydrolase, superfamily; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.571
PGRI_019370
Glycoside hydrolase, superfamily.
    
 0.571
PGRI_057580
Glutamine amidotransferase type 1.
    
  0.570
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.553
PGRI_033730
Glucanase; Belongs to the glycosyl hydrolase family 6.
    
 0.546
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.