STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGRI_063040Citrate synthase; Belongs to the citrate synthase family. (471 aa)    
Predicted Functional Partners:
PGRI_002430
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.992
PGRI_087400
Malate dehydrogenase.
  
 0.986
PGRI_080800
ATP-grasp fold, succinyl-CoA synthetase-type.
  
 0.986
PGRI_067220
Malate dehydrogenase, type 1; Belongs to the LDH/MDH superfamily.
  
 0.979
PGRI_087430
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 0.974
PGRI_069640
Malate synthase; Belongs to the malate synthase family.
   
 0.964
PGRI_075160
Fumarate lyase.
   
 0.964
PGRI_010740
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.963
PGRI_008330
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.959
PGRI_064630
Acetyl-coenzyme A synthetase.
  
 0.956
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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