Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PGRI_055780RNA polymerase II, large subunit, CTD. (514 aa)    
Predicted Functional Partners:
PGRI_060780
Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote.
    
 0.705
PGRI_026260
HAD-superfamily hydrolase, subfamily IIA, CECR5.
    
  0.630
PGRI_068450
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.630
PGRI_000270
HAD-superfamily hydrolase, subfamily IIA, CECR5.
    
  0.630
PGRI_043770
WD_REPEATS_REGION domain-containing protein.
    
 0.575
PGRI_043240
Concanavalin A-like lectin/glucanases superfamily.
    
 0.573
PGRI_038680
Protein kinase domain-containing protein.
    
 0.543
PGRI_012530
WD_REPEATS_REGION domain-containing protein.
    
 0.543
PGRI_077540
Nuclear cap-binding protein subunit 2.
    
  0.543
PGRI_067380
MIF4-like, type 1/2/3.
    
  0.538
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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