Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGRI_029230 | PGRI_039750 | A0A135LJB0 | A0A135L8Y3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome b5. | 0.968 |
PGRI_029230 | PGRI_059860 | A0A135LJB0 | A0A135LM30 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Tryptophan halogenase. | 0.663 |
PGRI_029230 | PGRI_080050 | A0A135LJB0 | A0A135LUY1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Eukaryotic molybdopterin oxidoreductase. | 0.979 |
PGRI_029230 | PGRI_094770 | A0A135LJB0 | A0A135LR65 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.555 |
PGRI_039750 | PGRI_029230 | A0A135L8Y3 | A0A135LJB0 | Cytochrome b5. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.968 |
PGRI_039750 | PGRI_059860 | A0A135L8Y3 | A0A135LM30 | Cytochrome b5. | Tryptophan halogenase. | 0.406 |
PGRI_039750 | PGRI_080050 | A0A135L8Y3 | A0A135LUY1 | Cytochrome b5. | Eukaryotic molybdopterin oxidoreductase. | 0.968 |
PGRI_059860 | PGRI_029230 | A0A135LM30 | A0A135LJB0 | Tryptophan halogenase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.663 |
PGRI_059860 | PGRI_039750 | A0A135LM30 | A0A135L8Y3 | Tryptophan halogenase. | Cytochrome b5. | 0.406 |
PGRI_059860 | PGRI_080050 | A0A135LM30 | A0A135LUY1 | Tryptophan halogenase. | Eukaryotic molybdopterin oxidoreductase. | 0.663 |
PGRI_059860 | PGRI_094770 | A0A135LM30 | A0A135LR65 | Tryptophan halogenase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.510 |
PGRI_080050 | PGRI_029230 | A0A135LUY1 | A0A135LJB0 | Eukaryotic molybdopterin oxidoreductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.979 |
PGRI_080050 | PGRI_039750 | A0A135LUY1 | A0A135L8Y3 | Eukaryotic molybdopterin oxidoreductase. | Cytochrome b5. | 0.968 |
PGRI_080050 | PGRI_059860 | A0A135LUY1 | A0A135LM30 | Eukaryotic molybdopterin oxidoreductase. | Tryptophan halogenase. | 0.663 |
PGRI_080050 | PGRI_094770 | A0A135LUY1 | A0A135LR65 | Eukaryotic molybdopterin oxidoreductase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.555 |
PGRI_094770 | PGRI_029230 | A0A135LR65 | A0A135LJB0 | Glyceraldehyde-3-phosphate dehydrogenase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.555 |
PGRI_094770 | PGRI_059860 | A0A135LR65 | A0A135LM30 | Glyceraldehyde-3-phosphate dehydrogenase. | Tryptophan halogenase. | 0.510 |
PGRI_094770 | PGRI_080050 | A0A135LR65 | A0A135LUY1 | Glyceraldehyde-3-phosphate dehydrogenase. | Eukaryotic molybdopterin oxidoreductase. | 0.555 |