STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGRI_006890Ubiquitin supergroup. (796 aa)    
Predicted Functional Partners:
PGRI_041250
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
PGRI_041400
Ribosomal protein L13, eukaryotic/archaeal.
  
 0.999
PGRI_042030
Ribosomal protein L27e.
   
 0.999
PGRI_045770
Zinc finger, ZZ-type.
    
 0.999
PGRI_049380
40S ribosomal protein S27.
   
 0.999
PGRI_049610
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
PGRI_049710
Ribosomal protein L21e.
   
 0.999
PGRI_048360
Ribosomal protein S10.
   
 0.999
PGRI_049720
Ribosomal protein S4/S9, eukaryotic/archaeal.
  
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.