STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGRI_009110SAC3/GANP/Nin1/mts3/eIF-3 p25. (466 aa)    
Predicted Functional Partners:
PGRI_006160
PCI/PINT associated module.
   
 
 0.947
PGRI_034310
Uncharacterized protein.
    
 
 0.907
PGRI_003800
PCI/PINT associated module.
   
 
 0.881
PGRI_063160
Uncharacterized protein.
   
    0.570
PGRI_073720
Cytochrome c1.
 
      0.530
PGRI_060780
Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote.
    
   0.454
PGRI_059370
SAC3/GANP/Nin1/mts3/eIF-3 p25.
   
 
 0.431
PGRI_018710
GYF domain-containing protein.
   
  
 0.422
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.