STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_0194Integral membrane sensor signal transduction histidine kinase; KEGG: ccs:CCNA_00248 sensor histidine protein kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (466 aa)    
Predicted Functional Partners:
Cseg_0193
Two component transcriptional regulator, Fis family; KEGG: ccs:CCNA_00247 two-component receiver protein; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver.
 
 0.992
Cseg_3724
Two component transcriptional regulator, Fis family; KEGG: ccs:CCNA_01845 two-component response regulator protein; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver.
 
 0.980
Cseg_3725
Integral membrane sensor signal transduction histidine kinase; KEGG: ccs:CCNA_01846 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
  
  
 
0.923
Cseg_3466
KEGG: bxe:Bxe_B0221 GAF sensor hybrid histidine kinase; PFAM: HWE histidine kinase; MASE1 domain protein; GAF domain protein; SMART: GAF domain protein.
  
 
 0.781
Cseg_3132
KEGG: ccs:CCNA_02434 cytosolic protein.
  
     0.727
Cseg_2219
PFAM: protein of unknown function DUF1467; KEGG: ccs:CCNA_02010 hypothetical protein.
  
     0.605
Cseg_0195
PFAM: electron transport protein SCO1/SenC; KEGG: ccs:CCNA_00249 SCO1/SenC family protein.
     
 0.600
Cseg_3383
PFAM: protein of unknown function DUF1153; KEGG: cak:Caul_1011 hypothetical protein.
  
    0.594
Cseg_0409
KEGG: ccs:CCNA_00564 sensory transduction protein kinase CenK; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
     0.573
Cseg_4245
Two component transcriptional regulator, winged helix family; KEGG: ccs:CCNA_03859 two-component response regulator CenR; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
 
 0.532
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.