STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_0209KEGG: ccs:CCNA_03593 integral membrane protein. (375 aa)    
Predicted Functional Partners:
Cseg_1913
PFAM: protein of unknown function DUF35; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: ccs:CCNA_01498 DNA-dependent DNA polymerase III subunit alpha.
  
     0.740
Cseg_2152
KEGG: ccs:CCNA_01941 cysteine desulfhydrase/selenocysteine lyase; PFAM: aminotransferase class V.
   
 
 0.734
Cseg_2254
PFAM: Phosphoglycerate mutase; KEGG: ccs:CCNA_02044 phosphoglycerate mutase.
  
     0.691
Cseg_2705
KEGG: ccs:CCNA_01235 transcriptional regulatory protein.
  
     0.682
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.668
Cseg_1439
KEGG: ccs:CCNA_02067 hypothetical protein.
  
     0.661
Cseg_1525
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: cak:Caul_1647 activator of HSP90 ATPase 1 family protein.
  
    0.618
Cseg_2034
KEGG: cak:Caul_2665 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
  
 0.607
Cseg_2255
KEGG: ccs:CCNA_02045 acetyl-coenzyme A synthetase.
 
     0.595
Cseg_1916
KEGG: ccs:CCNA_01501 protein kinase C-like superfamily protein.
 
     0.581
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.