STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_0499PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dfe:Dfer_3215 glycerophosphoryl diester phosphodiesterase. (308 aa)    
Predicted Functional Partners:
Cseg_0790
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ccs:CCNA_03276 glycerophosphoryl diester phosphodiesterase.
  
  
 
0.925
Cseg_0652
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ccs:CCNA_03381 glycerophosphoryl diester phosphodiesterase.
     
 0.911
Cseg_2904
Lysophospholipase; KEGG: ccs:CCNA_02336 lysophospholipase L2; PFAM: alpha/beta hydrolase fold.
    
 0.905
Cseg_0498
PFAM: metallophosphoesterase; KEGG: dfe:Dfer_2791 metallophosphoesterase.
 
   
 0.835
Cseg_2661
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.679
Cseg_3287
PFAM: FAD dependent oxidoreductase; KEGG: mrd:Mrad2831_2179 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 
 0.504
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.