STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_0803KEGG: ccs:CCNA_03257 chemotaxis receiver domain protein cheYIII; PFAM: response regulator receiver; SMART: response regulator receiver. (178 aa)    
Predicted Functional Partners:
Cseg_2826
PFAM: surface presentation of antigens (SPOA) protein; KEGG: cak:Caul_3160 hypothetical protein.
 
 
 0.949
Cseg_0427
KEGG: cak:Caul_0612 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein.
  
 0.944
Cseg_3752
KEGG: ccs:CCNA_00442 chemotaxis histidine kinase protein cheAI; PFAM: Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein.
  
 0.944
Cseg_3754
KEGG: ccs:CCNA_00440 virus protein.
  
 
 0.917
Cseg_3379
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.911
Cseg_3562
TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: ccs:CCNA_03459 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein.
  
 0.806
Cseg_0428
KEGG: cak:Caul_0613 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
  
  0.770
Cseg_0432
KEGG: cak:Caul_0616 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
  
  0.770
Cseg_2378
KEGG: cak:Caul_0637 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
  
  0.770
Cseg_3009
KEGG: cak:Caul_0637 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
  
  0.770
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.